ENH: treat case of removed files

Summary

The move script could not deal with non-existing entities.

Test Environment

Use a path that does not exist.

Check List for the Author

Please, prepare your MR for a review. Be sure to write a summary and a focus and create gitlab comments for the reviewer. They should guide the reviewer through the changes, explain your changes and also point out open questions. For further good practices have a look at our review guidelines

• All automated tests pass
• Reference related Issues
• Up-to-date CHANGELOG.md
• Annotations in code (Gitlab comments)
  • Intent of new code
  • Problems with old code
  • Why this implementation?

Check List for the Reviewer

• I understand the intent of this MR
• All automated tests pass
• Up-to-date CHANGELOG.md
• The test environment setup works and the intended behavior is reproducible in the test environment
• In-code documentation and comments are up-to-date.
• Check: Are there spezifications? Are they satisfied?

For further good practices have a look at our review guidelines.

misc/move_files/move_files.py

@@ -62,7 +62,7 @@ def rename(changes, chunksize=10):
             continue
         cont = db.Container()
 
-        for ii, (old, new) in chunk.iterrows():
+        for _, (old, new) in chunk.iterrows():
             try:
                 fi = db.File(path=old)
                 fi.retrieve()