MAINT: Remove debugging output

sample-management-custom/caosdb-server/scripting/bin/register_new_containers.py

@@ -126,7 +126,6 @@ def create_container_entities(responsible_id, container_type_id, container_size,
     # Post process child containers
     batch = post_process_containers(batch)
     try:
-        logger.info(batch)
         batch.insert()
     except Exception as e:
         logger.error("{} The registered containers could not be imported to the system. {}".format(
@@ -138,7 +137,7 @@ def create_container_entities(responsible_id, container_type_id, container_size,
     # Add to parent container
     if parent_container is not None:
         child_cont_prop = db.Property(name=get_entity_name("child_container_prop")).retrieve()
-        new_childs=[]
+        new_childs = []
         for entity in batch:
             new_childs += [entity.id]
         # Check if property Child container exists:
@@ -147,10 +146,10 @@ def create_container_entities(responsible_id, container_type_id, container_size,
         else:
             # Check if the container allready has childs
             if parent_container.get_property(child_cont_prop.name).value is None:
-                parent_container.get_property(child_cont_prop.name).value=new_childs
+                parent_container.get_property(child_cont_prop.name).value = new_childs
             else:
                 parent_container.get_property(child_cont_prop.name).value += new_childs
-        parent_container=post_process_parent_container(parent_container)
+        parent_container = post_process_parent_container(parent_container)
         parent_container.update()
 
     set_label_counter(container_type_id=container_type_id,
@@ -159,14 +158,14 @@ def create_container_entities(responsible_id, container_type_id, container_size,
 
 
 def get_template_name(container_entities, file_format_extension):
-    first_id=container_entities[0].id
-    last_id=container_entities[-1].id
+    first_id = container_entities[0].id
+    last_id = container_entities[-1].id
     return "container_template_(IDs_{}_to_{}).{}".format(first_id, last_id, file_format_extension)
 
 
 def get_parent_container(id):
     try:
-        parent=db.execute_query("FIND {}".format(id))[0]
+        parent = db.execute_query("FIND {}".format(id))[0]
         return parent
     except:
         logger.info(
@@ -178,7 +177,7 @@ def get_parent_container(id):
 
 def get_container_type(id):
     try:
-        type=db.execute_query("FIND {}".format(id))[0]
+        type = db.execute_query("FIND {}".format(id))[0]
         return type
     except:
         logger.error("{}The specified ContainerType could not be retrieved. {}".format(
@@ -187,13 +186,13 @@ def get_container_type(id):
 
 def create_csv_template(template_internal_path, container_entities, container_type, container_size, parent_container):
     if parent_container is None:
-        parent_container_label=""
+        parent_container_label = ""
     else:
-        parent_container_label=get_container_identifier(parent_container)
+        parent_container_label = get_container_identifier(parent_container)
     with open(template_internal_path, 'w') as template_csv:
-        writer=csv.writer(template_csv)
+        writer = csv.writer(template_csv)
         # Write header
-        headers=[
+        headers = [
             "entity_id",
             "container_type_rt",
             "container_size_prop",
@@ -205,13 +204,13 @@ def create_csv_template(template_internal_path, container_entities, container_ty
             "Container Contents",
             "PDFReport"
         ]
-        headers=[get_column_header_name(header) for header in headers]
+        headers = [get_column_header_name(header) for header in headers]
         writer.writerow(headers)
         # Write description with leading '#'
-        descriptions=get_description_row(headers)
+        descriptions = get_description_row(headers)
         if descriptions:
             writer.writerow(descriptions)
-        options=get_options_row(headers)
+        options = get_options_row(headers)
         if options:
             writer.writerow(options)
         # Write entity data to the lines
@@ -229,34 +228,34 @@ def create_csv_template(template_internal_path, container_entities, container_ty
 
 
 def main():
-    parser=get_parser()
-    args=parser.parse_args()
+    parser = get_parser()
+    args = parser.parse_args()
 
     global logger
     # Check whether executed locally or as an SSS depending on
     # auth_token argument.
     if hasattr(args, "auth_token") and args.auth_token:
         db.configure_connection(auth_token=args.auth_token)
-        debug_file=configure_server_side_logging()
+        debug_file = configure_server_side_logging()
         # logger = logging.getLogger("caosadvancedtools")
     else:
         # logging config for local execution
         # logger = logging.getLogger("caosadvancedtools")
         logger.addHandler(logging.StreamHandler(sys.stdout))
         logger.setLevel(logging.DEBUG)
-        debug_file=None
+        debug_file = None
 
     if hasattr(args, "filename") and args.filename:
         # Read the input from the form (form.json)
         with open(args.filename) as form_json:
-            form_data=json.load(form_json)
+            form_data = json.load(form_json)
 
-            parent_container=get_parent_container(form_data["parent_id"])
-            container_type=get_container_type(form_data["container_type"])
-            container_size=form_data["container_size"]
+            parent_container = get_parent_container(form_data["parent_id"])
+            container_type = get_container_type(form_data["container_type"])
+            container_size = form_data["container_size"]
 
             # Create entities in BIS
-            container_entities=create_container_entities(
+            container_entities = create_container_entities(
                 responsible_id=int(form_data["responsible_entity"]),
                 container_type_id=int(form_data["container_type"]),
                 container_size=container_size,
@@ -270,9 +269,9 @@ def main():
                 return 1
 
             # Create template file on the server
-            file_format_extension=form_data["file_format"]
-            template_name=get_template_name(container_entities, file_format_extension)
-            template_display_path, template_internal_path=helper.get_shared_filename(
+            file_format_extension = form_data["file_format"]
+            template_name = get_template_name(container_entities, file_format_extension)
+            template_display_path, template_internal_path = helper.get_shared_filename(
                 template_name)
             if (file_format_extension == "csv"):
                 create_csv_template(