FIX: update example config files

pylinkahead.ini.example

-# The INI file must be located either in
-# - $CWD/pylinkahead.ini
-# - $HOME/.pylinkahead.ini
-# - the location given in the env variable PYLINKAHEADINI
-
-[Connection]
-# url=https://demo.indiscale.com/
-url=https://localhost:10443/
-
-## If this option is set, the SSL certificate will be ignored.  Use with care!
-ssl_insecure=1
-
-username=admin
-
-## The password input method can be chosen with the `password_method` setting,
-## which by default is set to `plain`.
-##
-## DEFAULT: the password method is `plain`, now the password must be saved as
-## plain text.
-password_method=input
-# password_method=plain
-# password=caosdb
-
-## OR: `input`: username is optional, password is entered by the user directly
-# password_method=input
-
-## OR: `pass`: password is retrieved from the "pass" password manager
-# password_method=pass
-# password_identifier=...
-
-## OR: `keyring`: using the system keyring/wallet (macOS, GNOME, KDE, Windows)
-## requires installation of the keyring python package:
-## pip install keyring
-# password_method=keyring
-
-timeout=10000
-

qualitycheck_config.example.toml

-s3_endpoint = "http://localhost:9000"
+s3_endpoint = "https://s3.computational.bio.uni-giessen.de"
 s3_bucket = "ruqad"

secrets.example.sh

@@ -8,15 +8,17 @@
 
 ## Kadi
 # Host and token to retrieve data
-KADIHOST=https://demo-kadi4mat.iam.kit.edu
+KADIHOST=http://localhost/kadi
 KADITOKEN=pat_KADI123456789
 
 ## S3
 # Key ID and secret to access the S3 bucket defined in `qualitycheck_config.toml`.
-S3_ACCESS_KEY_ID=456S3S3S3654
-S3_SECRET_ACCESS_KEY=123S3S3S3987
+#S3_ACCESS_KEY_ID=456S3S3S3654
+#S3_SECRET_ACCESS_KEY=123S3S3S3987
 
 ## Gitlab
 # Tokens to trigger a pipeline run and to get pipeline status and result via the API.
-GITLAB_PIPELINE_TOKEN=glptt-123456789
-GITLAB_API_TOKEN=glpat-987654321
+#GITLAB_PIPELINE_TOKEN=glptt-123456789
+#GITLAB_API_TOKEN=glpat-987654321
+
+SKIP_QUALITY_CHECK=True