diff --git a/pylinkahead.template.ini b/pylinkahead.example.ini similarity index 100% rename from pylinkahead.template.ini rename to pylinkahead.example.ini diff --git a/pylinkahead.ini.example b/pylinkahead.ini.example deleted file mode 100644 index 3846b7f5564f62f74f4f3f0ed6c8ff19cac7bd94..0000000000000000000000000000000000000000 --- a/pylinkahead.ini.example +++ /dev/null @@ -1,37 +0,0 @@ -# The INI file must be located either in -# - $CWD/pylinkahead.ini -# - $HOME/.pylinkahead.ini -# - the location given in the env variable PYLINKAHEADINI - -[Connection] -# url=https://demo.indiscale.com/ -url=https://localhost:10443/ - -## If this option is set, the SSL certificate will be ignored. Use with care! -ssl_insecure=1 - -username=admin - -## The password input method can be chosen with the `password_method` setting, -## which by default is set to `plain`. -## -## DEFAULT: the password method is `plain`, now the password must be saved as -## plain text. -password_method=input -# password_method=plain -# password=caosdb - -## OR: `input`: username is optional, password is entered by the user directly -# password_method=input - -## OR: `pass`: password is retrieved from the "pass" password manager -# password_method=pass -# password_identifier=... - -## OR: `keyring`: using the system keyring/wallet (macOS, GNOME, KDE, Windows) -## requires installation of the keyring python package: -## pip install keyring -# password_method=keyring - -timeout=10000 - diff --git a/qualitycheck_config.example.toml b/qualitycheck_config.example.toml index 51984f822531a7d7e0103e0fca86a176c8a44817..1e12814e82983fdbdf91c4c8102d8c049145c745 100644 --- a/qualitycheck_config.example.toml +++ b/qualitycheck_config.example.toml @@ -1,2 +1,2 @@ -s3_endpoint = "http://localhost:9000" +s3_endpoint = "https://s3.computational.bio.uni-giessen.de" s3_bucket = "ruqad" diff --git a/secrets.example.sh b/secrets.example.sh index 9dd0047fa8444caa8c915aa5fe74618be921f0ca..7ab3fdda5f4df4dccb6165ef31bafb5990c22938 100644 --- a/secrets.example.sh +++ b/secrets.example.sh @@ -8,15 +8,17 @@ ## Kadi # Host and token to retrieve data -KADIHOST=https://demo-kadi4mat.iam.kit.edu +KADIHOST=http://localhost/kadi KADITOKEN=pat_KADI123456789 ## S3 # Key ID and secret to access the S3 bucket defined in `qualitycheck_config.toml`. -S3_ACCESS_KEY_ID=456S3S3S3654 -S3_SECRET_ACCESS_KEY=123S3S3S3987 +#S3_ACCESS_KEY_ID=456S3S3S3654 +#S3_SECRET_ACCESS_KEY=123S3S3S3987 ## Gitlab # Tokens to trigger a pipeline run and to get pipeline status and result via the API. -GITLAB_PIPELINE_TOKEN=glptt-123456789 -GITLAB_API_TOKEN=glpat-987654321 +#GITLAB_PIPELINE_TOKEN=glptt-123456789 +#GITLAB_API_TOKEN=glpat-987654321 + +SKIP_QUALITY_CHECK=True