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FIX: `to_table` failed on lists

Merged Daniel Hornung requested to merge f-fix-table-converter-list into dev
All threads resolved!
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4
@@ -25,6 +25,7 @@ import re
import sys
import caosdb as db
import numpy as np
import pandas as pd
@@ -58,15 +59,25 @@ def to_table(container):
properties.update([generate_property_name(p)
for p in container[0].get_properties()])
df = pd.DataFrame(columns=list(properties))
rts = set([p.name for p in container[0].parents])
rts = {p.name for p in container[0].parents}
for ii, rec in enumerate(container):
if set([p.name for p in rec.parents]) != rts:
if {p.name for p in rec.parents} != rts:
raise ValueError("Parents differ")
for p in rec.get_properties():
df.loc[ii, generate_property_name(p)] = p.value
row_dict = {}
for prop in rec.get_properties():
propname = generate_property_name(prop)
row_dict[propname] = prop.value
# if propname == "p5":
# breakpoint()
# if isinstance(prop.value, list):
# if propname not in df:
# df[propname] = pd.Series(dtype=object)
# elif df[propname].dtype != object:
# df[propname] = df[propname].astype(object)
# df.at[ii, propname] = prop.value
df.loc[ii] = row_dict
return df
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