Release 0.3

Summary

#54 (closed)

Focus

Point the reviewer to the core of the code change. Where should they start
reading? What should they focus on (e.g. security, performance,
maintainability, user-friendliness, compliance with the specs, finding more
corner cases, concrete questions)?

Test Environment

How to set up a test environment for manual testing?

Check List for the Author

Please, prepare your MR for a review. Be sure to write a summary and a focus and create gitlab comments for the reviewer. They should guide the reviewer through the changes, explain your changes and also point out open questions. For further good practices have a look at our review guidelines

• All automated tests pass
• Reference related Issues
• Up-to-date CHANGELOG.md
• Annotations in code (Gitlab comments)
  • Intent of new code
  • Problems with old code
  • Why this implementation?

Check List for the Reviewer

• I understand the intent of this MR
• All automated tests pass
• Up-to-date CHANGELOG.md
• The test environment setup works and the intended behavior is reproducible in the test environment
• In-code documentation and comments are up-to-date.
• Check: Are there spezifications? Are they satisfied?

For further good practices have a look at our review guidelines.

.docker/Dockerfile

-FROM debian:latest
+FROM debian:10
 RUN apt-get update && \
-	 apt-get install \
-	 curl \
-	 python3 \
-	 python3-pip \
-	 python3-requests \
-	 python3-pandas \
-	 python3-html2text \
-	 git \
-	 openjdk-11-jdk-headless \
-	 python-autopep8 \
-     python3-pytest \
-     libxml2 \
-	 -y
+    apt-get install \
+    curl \
+    libhdf5-dev \
+    pkgconf \
+    python3 \
+    python3-pip \
+    python3-requests \
+    python3-pandas \
+    python3-html2text \
+    python3-sphinx \
+    tox \
+    git \
+    openjdk-11-jdk-headless \
+    python-autopep8 \
+    python3-pytest \
+    libxml2 \
+    -y
+
+
 COPY .docker/wait-for-it.sh /wait-for-it.sh
-ADD https://gitlab.com/api/v4/projects/13656973/repository/branches/main \
+ADD https://gitlab.com/api/v4/projects/13656973/repository/branches/dev \
    pylib_version.json
 RUN git clone https://gitlab.com/caosdb/caosdb-pylib.git && \
-   cd caosdb-pylib && pip3 install .
-ADD https://gitlab.com/api/v4/projects/13656965/repository/branches/master \
-   model_version.json
-RUN git clone https://gitlab.com/caosdb/caosdb-models.git && \
-   cd caosdb-models && pip3 install .
-ADD https://gitlab.com/api/v4/projects/13601752/repository/branches/master \
-   scifolder_version.json
-RUN git clone \
-    https://gitlab.com/henrik_indiscale/scifolder.git && \
-    cd scifolder && pip3 install .
+   cd caosdb-pylib && git checkout dev && pip3 install .
+# At least recommonmark 0.6 required.
+RUN pip3 install recommonmark sphinx-rtd-theme
 COPY . /git
 RUN rm -r /git/.git \
-    && mv /git/.docker/pycaosdb.ini /git/integrationtests/full_test
-RUN cd /git && pip3 install .
-WORKDIR /git/integrationtests/full_test
-CMD /wait-for-it.sh caosdb-server:10443 -t 500 -- ./test.sh
+    && mv /git/.docker/pycaosdb.ini /git/integrationtests
+RUN cd /git && pip3 install .[h5-crawler]
+WORKDIR /git/integrationtests
+CMD /wait-for-it.sh caosdb-server:10443 -t 500 -- ./test.sh --force