Skip to content
GitLab
Explore
Sign in
Register
Primary navigation
Search or go to…
Project
B
BIDS-cfood
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Iterations
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Locked files
Deploy
Releases
Package registry
Container registry
Model registry
Operate
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
Repository analytics
Code review analytics
Issue analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
GitLab community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
caosdb
Software
crawler-extensions
BIDS-cfood
Commits
9f8f825f
Commit
9f8f825f
authored
1 year ago
by
Henrik tom Wörden
Browse files
Options
Downloads
Patches
Plain Diff
MAINT: rename in readme
parent
479d9af8
No related branches found
No related tags found
No related merge requests found
Changes
1
Show whitespace changes
Inline
Side-by-side
Showing
1 changed file
README.md
+9
-9
9 additions, 9 deletions
README.md
with
9 additions
and
9 deletions
README.md
+
9
−
9
View file @
9f8f825f
...
@@ -3,7 +3,7 @@
...
@@ -3,7 +3,7 @@
## Welcome
## Welcome
This is a module for the
[
CaosDB
-Crawler
](
https://gitlab.com/
caosdb/caosdb
-crawler/
)
This is a module for the
[
LinkAhead
-Crawler
](
https://gitlab.com/
linkahead/linkahead
-crawler/
)
that can read folder structures that comply with the
that can read folder structures that comply with the
[
BIDS specification
](
https://bids-specification.readthedocs.io
)
.
[
BIDS specification
](
https://bids-specification.readthedocs.io
)
.
...
@@ -16,9 +16,9 @@ setup this code.
...
@@ -16,9 +16,9 @@ setup this code.
The BIDS Standard defines rules for how data is stored in files and how those
The BIDS Standard defines rules for how data is stored in files and how those
(and directories) must be named. Those rules can be checked with the
(and directories) must be named. Those rules can be checked with the
`bids-validator`
. The current implementation of this cfood and the corresponding
`bids-validator`
. The current implementation of this cfood and the corresponding
[
converter
](
https://gitlab.indiscale.com/
caosdb
/src/crawler-converters/bids-converter
)
[
converter
](
https://gitlab.indiscale.com/
linkahead
/src/crawler-converters/bids-converter
)
does the following:
does the following:
-
the
`dataset_description.json`
is parsed and translated to
CaosDB
Entities
-
the
`dataset_description.json`
is parsed and translated to
LinkAhead
Entities
-
the key value pairs of folder and file names (e.g. "sub-
<sub-label>
") are
-
the key value pairs of folder and file names (e.g. "sub-
<sub-label>
") are
parsed and the stored in appropriate Records
parsed and the stored in appropriate Records
-
the contents of measurement folders such as 'eeg', 'func' or 'anat' are
-
the contents of measurement folders such as 'eeg', 'func' or 'anat' are
...
@@ -42,20 +42,20 @@ does the following:
...
@@ -42,20 +42,20 @@ does the following:
## Further Reading
## Further Reading
Please refer to the
[
official documentation
](
https://docs.indiscale.com/
caosdb
-crawler/
)
of the
CaosDB
-Crawler for more information.
Please refer to the
[
official documentation
](
https://docs.indiscale.com/
linkahead
-crawler/
)
of the
LinkAhead
-Crawler for more information.
## Contributing
## Contributing
Thank you very much to all contributers—
[
past, present
](
https://gitlab.com/
caosdb/caosdb
/-/blob/dev/HUMANS.md
)
, and prospective ones.
Thank you very much to all contributers—
[
past, present
](
https://gitlab.com/
linkahead/linkahead
/-/blob/dev/HUMANS.md
)
, and prospective ones.
### Code of Conduct
### Code of Conduct
By participating, you are expected to uphold our
[
Code of Conduct
](
https://gitlab.com/
caosdb/caosdb
/-/blob/dev/CODE_OF_CONDUCT.md
)
.
By participating, you are expected to uphold our
[
Code of Conduct
](
https://gitlab.com/
linkahead/linkahead
/-/blob/dev/CODE_OF_CONDUCT.md
)
.
### How to Contribute
### How to Contribute
*
You found a bug, have a question, or want to request a feature? Please
*
You found a bug, have a question, or want to request a feature? Please
[
create an issue
](
https://gitlab.com/
caosdb
/TODO-fill-url
)
.
[
create an issue
](
https://gitlab.com/
linkahead
/TODO-fill-url
)
.
*
You want to contribute code?
*
You want to contribute code?
*
**Forking:**
Please fork the repository and create a merge request in GitLab and choose this repository as
*
**Forking:**
Please fork the repository and create a merge request in GitLab and choose this repository as
target. Make sure to select "Allow commits from members who can merge the target branch" under
target. Make sure to select "Allow commits from members who can merge the target branch" under
...
@@ -65,8 +65,8 @@ By participating, you are expected to uphold our [Code of Conduct](https://gitla
...
@@ -65,8 +65,8 @@ By participating, you are expected to uphold our [Code of Conduct](https://gitla
using the
`autopep8`
tool (
`autopep8 -i -r ./`
). Please write your doc strings following the
using the
`autopep8`
tool (
`autopep8 -i -r ./`
). Please write your doc strings following the
[
NumpyDoc
](
https://numpydoc.readthedocs.io/en/latest/format.html
)
conventions.
[
NumpyDoc
](
https://numpydoc.readthedocs.io/en/latest/format.html
)
conventions.
*
You can also contact us at
**info (AT) caosdb.de**
and join the
*
You can also contact us at
**info (AT) caosdb.de**
and join the
CaosDB
community on
LinkAhead
community on
[
#
caosdb
:matrix.org
](
https://matrix.to/#/!unwwlTfOznjEnMMXxf:matrix.org
)
.
[
#
linkahead
:matrix.org
](
https://matrix.to/#/!unwwlTfOznjEnMMXxf:matrix.org
)
.
## License
## License
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment