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caosdb
Software
CaosDB Crawler
Commits
7e28a0aa
Commit
7e28a0aa
authored
1 year ago
by
Alexander Schlemmer
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DOC: Added copyright message and removed unused imports in test_scanner
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!160
STY: styling
,
!126
Transformers
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1 year ago
Stage: info
Stage: setup
Stage: cert
Stage: style
Stage: test
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unittests/test_scanner.py
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7e28a0aa
#!/usr/bin/env python3
# encoding: utf-8
#
# This file is a part of the CaosDB Project.
#
# Copyright (C) 2023 Indiscale GmbH <info@indiscale.com>
# Copyright (C) 2023 Henrik tom Wörden <h.tomwoerden@indiscale.com>
# 2023 Research Group Biomedical Physics,
# Max-Planck-Institute for Dynamics and Self-Organization Göttingen
# Alexander Schlemmer <alexander.schlemmer@ds.mpg.de>
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Affero General Public License for more details.
#
# You should have received a copy of the GNU Affero General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
#
"""
Unit test functions for the scanner.
"""
import
json
import
logging
import
os
import
warnings
from
copy
import
deepcopy
from
functools
import
partial
from
functools
import
partial
from
os.path
import
basename
,
dirname
,
join
from
pathlib
import
Path
from
pathlib
import
Path
from
tempfile
import
NamedTemporaryFile
from
tempfile
import
NamedTemporaryFile
from
unittest.mock
import
MagicMock
,
Mock
,
patch
from
unittest.mock
import
MagicMock
,
Mock
,
patch
import
caosdb
as
db
import
caosdb
as
db
import
caosdb.common.models
as
dbmodels
import
pytest
import
pytest
import
yaml
import
yaml
from
caoscrawler.crawl
import
(
Crawler
,
SecurityMode
,
_treat_deprecated_prefix
,
from
caoscrawler.crawl
import
Crawler
crawler_main
,
split_restricted_path
)
from
caoscrawler.debug_tree
import
DebugTree
from
caoscrawler.debug_tree
import
DebugTree
from
caoscrawler.identifiable
import
Identifiable
from
caoscrawler.identifiable_adapters
import
(
CaosDBIdentifiableAdapter
,
IdentifiableAdapter
,
LocalStorageIdentifiableAdapter
)
from
caoscrawler.scanner
import
(
create_converter_registry
,
load_definition
,
from
caoscrawler.scanner
import
(
create_converter_registry
,
load_definition
,
scan_directory
,
scan_structure_elements
)
scan_directory
,
scan_structure_elements
)
from
caoscrawler.stores
import
GeneralStore
,
RecordStore
from
caoscrawler.structure_elements
import
(
DictElement
,
DictListElement
,
from
caoscrawler.structure_elements
import
(
DictElement
,
DictListElement
,
DictTextElement
,
File
)
DictTextElement
,
File
)
from
caosdb.apiutils
import
compare_entities
from
caosdb.cached
import
cache_clear
from
caosdb.exceptions
import
EmptyUniqueQueryError
from
pytest
import
raises
from
pytest
import
raises
from
utils
import
dircheckstr
as
dircheck_base
from
utils
import
dircheckstr
as
dircheck_base
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