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caosdb
Software
CaosDB Crawler
Commits
398ffb75
Commit
398ffb75
authored
Jul 21, 2022
by
Henrik tom Wörden
Browse files
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TST: refactor test
parent
f5d985a7
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2 merge requests
!53
Release 0.1
,
!32
ENH: add security levels that may prevent updates or inserts
Changes
2
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2 changed files
src/caoscrawler/crawl.py
+4
-4
4 additions, 4 deletions
src/caoscrawler/crawl.py
unittests/test_tool.py
+78
-33
78 additions, 33 deletions
unittests/test_tool.py
with
82 additions
and
37 deletions
src/caoscrawler/crawl.py
+
4
−
4
View file @
398ffb75
...
...
@@ -762,14 +762,14 @@ class Crawler(object):
pass
@staticmethod
def
_get_
property_entity
(
name
):
def
_get_
entity_by_name
(
name
):
return
db
.
Entity
(
name
=
name
).
retrieve
()
@staticmethod
def
execute_inserts_in_list
(
to_be_inserted
,
securityMode
,
run_id
:
int
=
None
):
for
record
in
to_be_inserted
:
for
prop
in
record
.
properties
:
entity
=
Crawler
.
_get_
property_entity
(
prop
.
name
)
entity
=
Crawler
.
_get_
entity_by_name
(
prop
.
name
)
_resolve_datatype
(
prop
,
entity
)
print
(
"
INSERT
"
)
print
(
to_be_inserted
)
...
...
@@ -785,10 +785,10 @@ class Crawler(object):
for
record
in
rec_list
:
for
parent
in
record
.
parents
:
if
parent
.
id
is
None
:
parent
.
id
=
db
.
E
ntity
(
name
=
parent
.
name
).
retrieve
().
id
parent
.
id
=
Crawler
.
_get_e
ntity
_by_
name
(
parent
.
name
).
id
for
prop
in
record
.
properties
:
if
prop
.
id
is
None
:
entity
=
db
.
E
ntity
(
name
=
prop
.
name
)
.
retrieve
()
entity
=
Crawler
.
_get_e
ntity
_by_
name
(
prop
.
name
)
prop
.
id
=
entity
.
id
_resolve_datatype
(
prop
,
entity
)
...
...
This diff is collapsed.
Click to expand it.
unittests/test_tool.py
+
78
−
33
View file @
398ffb75
...
...
@@ -542,55 +542,100 @@ def test_replace_entities_with_ids(crawler):
@patch
(
"
caoscrawler.crawl.db.Container.insert
"
)
@patch
(
"
caoscrawler.crawl.db.Container.update
"
)
@patch
(
"
caoscrawler.crawl.Crawler.set_ids_and_datatype_of_parents_and_properties
"
)
@patch
(
"
caoscrawler.crawl.Crawler._get_property_entity
"
)
@patch
(
"
caoscrawler.crawl.UpdateCache.insert
"
)
def
test_security_mode_trivial
(
UpdateCacheMock
,
get_prop_mock
,
set_id_mock
,
update_mock
,
insert_mock
,
ident
):
get_prop_mock
.
side_effect
=
lambda
x
:
db
.
Property
(
name
=
"
A
"
)
def
test_security_mode_trivial
(
updateCacheMock
,
insmock
,
upmock
,
ident
):
crawler
=
Crawler
(
debug
=
True
,
securityMode
=
SecurityMode
.
RETRIEVE
)
crawler
.
crawl_directory
(
rfp
(
"
test_directories
"
,
"
examples_article
"
),
rfp
(
"
scifolder_cfood.yml
"
))
crawler
.
identifiableAdapter
=
ident
def
find_record
(
name
):
print
(
name
)
return
[
el
for
el
in
ident
.
get_records
()
if
el
.
name
==
name
][
0
]
Crawler
.
_get_entity_by_name
=
find_record
#Crawler._get_entity_by_name = lambda x: db.RecordType(id=1111, name="A")
insl
,
updl
=
crawler
.
synchronize
(
commit_changes
=
True
)
assert
crawler
.
run_id
is
not
None
ins
ert_
mock
.
assert_not_called
()
up
date_mock
.
assert_not_called
()
assert
U
pdateCacheMock
.
call_count
==
0
insmock
.
assert_not_called
()
up
mock
.
update
.
assert_not_called
()
u
pdateCacheMock
.
assert_not_called
()
@patch
(
"
caoscrawler.crawl.db.Container.insert
"
)
@patch
(
"
caoscrawler.crawl.db.Container.update
"
)
@patch
(
"
caoscrawler.crawl.Crawler.set_ids_and_datatype_of_parents_and_properties
"
)
@patch
(
"
caoscrawler.crawl.Crawler._get_property_entity
"
)
@patch
(
"
caoscrawler.crawl.UpdateCache.insert
"
)
def
test_security_mode_trivial
(
UpdateCacheMock
,
get_prop_mock
,
set_id_mock
,
update_mock
,
insert_mock
,
ident
):
get_prop_mock
.
side_effect
=
lambda
x
:
db
.
Property
(
name
=
"
A
"
)
def
test_security_mode_forbidden
(
updateCacheMock
,
insmock
,
upmock
,
ident
):
crawler
=
Crawler
(
debug
=
True
,
securityMode
=
SecurityMode
.
RETRIEVE
)
crawler
.
crawl_directory
(
rfp
(
"
test_directories
"
,
"
examples_article
"
),
rfp
(
"
scifolder_cfood.yml
"
))
crawler
.
identifiableAdapter
=
ident
def
find_record
(
name
):
name
=
name
.
lower
()
state
=
{
"
person
"
:
(
db
.
RecordType
(
id
=
10001
)
.
add_parent
(
name
=
"
Person
"
)
.
add_property
(
name
=
"
first_name
"
)
.
add_property
(
name
=
"
last_name
"
)),
"
measurement
"
:
(
db
.
RecordType
(
id
=
10002
)
.
add_parent
(
name
=
"
Measurement
"
)
.
add_property
(
name
=
"
identifier
"
)
.
add_property
(
name
=
"
date
"
)
.
add_property
(
name
=
"
project
"
)),
"
project
"
:
(
db
.
RecordType
(
id
=
10003
)
.
add_parent
(
name
=
"
Project
"
)
.
add_property
(
name
=
"
date
"
)
.
add_property
(
name
=
"
identifier
"
)),
"
first_name
"
:
db
.
Property
(
name
=
"
first_name
"
,
datatype
=
db
.
TEXT
,
id
=
10004
),
"
responsible
"
:
db
.
Property
(
name
=
"
responsible
"
,
datatype
=
"
Person
"
,
id
=
10005
),
"
last_name
"
:
db
.
Property
(
name
=
"
last_name
"
,
datatype
=
db
.
TEXT
,
id
=
10006
),
"
identifier
"
:
db
.
Property
(
name
=
"
identifier
"
,
datatype
=
db
.
TEXT
,
id
=
10007
),
"
date
"
:
db
.
Property
(
name
=
"
date
"
,
datatype
=
db
.
DATETIME
,
id
=
10008
),
}
return
state
[
name
]
Crawler
.
_get_entity_by_name
=
find_record
del
ident
.
_records
[
-
1
]
insl
,
updl
=
crawler
.
synchronize
(
commit_changes
=
True
)
assert
crawler
.
run_id
is
not
None
insmock
.
assert_not_called
()
upmock
.
update
.
assert_not_called
()
assert
updateCacheMock
.
call_count
==
1
@patch
(
"
caoscrawler.crawl.db.Container.update
"
)
@patch
(
"
caoscrawler.crawl.db.Container.insert
"
)
@patch
(
"
caoscrawler.crawl.UpdateCache.insert
"
)
def
test_security_mode_forbidden_up
(
updateCacheMock
,
insmock
,
upmock
,
ident
):
crawler
=
Crawler
(
debug
=
True
,
securityMode
=
SecurityMode
.
INSERT
)
crawler
.
crawl_directory
(
rfp
(
"
test_directories
"
,
"
examples_article
"
),
rfp
(
"
scifolder_cfood.yml
"
))
crawler
.
identifiableAdapter
=
ident
def
find_record
(
name
):
name
=
name
.
lower
()
state
=
{
"
person
"
:
(
db
.
RecordType
(
id
=
10001
)
.
add_parent
(
name
=
"
Person
"
)
.
add_property
(
name
=
"
first_name
"
)
.
add_property
(
name
=
"
last_name
"
)),
"
measurement
"
:
(
db
.
RecordType
(
id
=
10002
)
.
add_parent
(
name
=
"
Measurement
"
)
.
add_property
(
name
=
"
identifier
"
)
.
add_property
(
name
=
"
date
"
)
.
add_property
(
name
=
"
project
"
)),
"
project
"
:
(
db
.
RecordType
(
id
=
10003
)
.
add_parent
(
name
=
"
Project
"
)
.
add_property
(
name
=
"
date
"
)
.
add_property
(
name
=
"
identifier
"
)),
"
first_name
"
:
db
.
Property
(
name
=
"
first_name
"
,
datatype
=
db
.
TEXT
,
id
=
10004
),
"
responsible
"
:
db
.
Property
(
name
=
"
responsible
"
,
datatype
=
"
Person
"
,
id
=
10005
),
"
last_name
"
:
db
.
Property
(
name
=
"
last_name
"
,
datatype
=
db
.
TEXT
,
id
=
10006
),
"
identifier
"
:
db
.
Property
(
name
=
"
identifier
"
,
datatype
=
db
.
TEXT
,
id
=
10007
),
"
date
"
:
db
.
Property
(
name
=
"
date
"
,
datatype
=
db
.
DATETIME
,
id
=
10008
),
}
return
state
[
name
]
Crawler
.
_get_entity_by_name
=
find_record
del
ident
.
_registered_identifiables
[
"
Person
"
]
insl
,
updl
=
crawler
.
synchronize
(
commit_changes
=
True
)
assert
crawler
.
run_id
is
not
None
insert_mock
.
assert_not_called
()
update_mock
.
assert_not_called
()
assert
UpdateCacheMock
.
call_count
==
2
#
# @patch("caoscrawler.crawl.db.Container.insert")
# @patch("caoscrawler.crawl.db.Container.update")
# @patch("caoscrawler.crawl.Crawler.set_ids_and_datatype_of_parents_and_properties")
# @patch("caoscrawler.crawl.UpdateCache.insert")
# def test_security_mode_insert_allowed(UpdateCacheMock, set_id_mock, update_mock, insert_mock,
# ident):
# crawler = Crawler(debug=True, securityMode=SecurityMode.INSERT)
# crawler.crawl_directory(rfp("test_directories", "examples_article"),
# rfp("scifolder_cfood.yml"))
# crawler.identifiableAdapter = ident
# del ident._registered_identifiables["Person"]
# insl, updl = crawler.synchronize(commit_changes=True)
# insert_mock.assert_called()
# update_mock.assert_not_called()
# assert UpdateCacheMock.call_count == 1
insmock
.
assert_called_once
()
upmock
.
update
.
assert_not_called
()
assert
updateCacheMock
.
call_count
==
1
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