Filling XLSX: Everything except multiple choice.

Summary

For caosdb/customers/dimr/management#219:

Filling XLSX templates from JSON works now.

Focus

• Correct handling of foreign keys
• Correct handling of other lists

Test Environment

Run the unit tests.

Check List for the Author

Please, prepare your MR for a review. Be sure to write a summary and a focus and create gitlab comments for the reviewer. They should guide the reviewer through the changes, explain your changes and also point out open questions. For further good practices have a look at our review guidelines

• All automated tests pass
• Reference related issues
• Up-to-date CHANGELOG.md (or not necessary)
• Up-to-date JSON schema (or not necessary)
• Appropriate user and developer documentation (or not necessary)
  • How do I use the software? Assume "stupid" users.
  • How do I develop or debug the software? Assume novice developers.
• Annotations in code (Gitlab comments)
  • Intent of new code
  • Problems with old code
  • Why this implementation?

Check List for the Reviewer

• I understand the intent of this MR
• All automated tests pass
• Up-to-date CHANGELOG.md (or not necessary)
• Appropriate user and developer documentation (or not necessary)
• The test environment setup works and the intended behavior is reproducible in the test environment
• In-code documentation and comments are up-to-date.
• Check: Are there specifications? Are they satisfied?

For further good practices have a look at our review guidelines.

src/caosadvancedtools/scifolder/experiment_cfood.py

@@ -16,19 +16,16 @@
 # You should have received a copy of the GNU Affero General Public License
 # along with this program. If not, see <https://www.gnu.org/licenses/>.
 
-from typing import TYPE_CHECKING
-
 import caosdb as db
-from caosadvancedtools.cfood import (AbstractFileCFood, assure_has_property,
-                                     assure_object_is_in_list)
+from caosadvancedtools.cfood import (AbstractFileCFood, assure_has_description,
+                                     assure_has_parent, assure_has_property,
+                                     assure_object_is_in_list, get_entity)
+from caosadvancedtools.read_md_header import get_header
 
 from .generic_pattern import full_pattern
 from .utils import parse_responsibles, reference_records_corresponding_to_files
 from .withreadme import DATAMODEL as dm
-from .withreadme import RESULTS, REVISIONOF, WithREADME, get_glob
-
-if TYPE_CHECKING and sys.version_info > (3, 7):
-    from typing import Tuple
+from .withreadme import RESULTS, REVISIONOF, SCRIPTS, WithREADME, get_glob
 
 
 class ExperimentCFood(AbstractFileCFood, WithREADME):
@@ -43,9 +40,6 @@ class ExperimentCFood(AbstractFileCFood, WithREADME):
 
     def __init__(self,  *args, **kwargs):
         super().__init__(*args, **kwargs)
-        self.project = db.Record()
-        self.experiment = db.Record()
-        self.people = []
         WithREADME.__init__(self)
 
         self.name_map = {},
@@ -58,7 +52,7 @@ class ExperimentCFood(AbstractFileCFood, WithREADME):
         self.find_referenced_files([RESULTS])
 
     @staticmethod
-    def create_identifiable_experiment(match) -> Tuple[db.Record, db.Record]:
+    def create_identifiable_experiment(match):
         # create the project identifiable
         name = ExperimentCFood.name_beautifier(
             match.group("project_identifier"))