insert_model.py

#!/usr/bin/env python3
import caosdb as db
import h5py
from caosadvancedtools.cfoods.h5 import H5CFood
from caosadvancedtools.models.data_model import DataModel
from caosadvancedtools.models.parser import parse_model_from_yaml


def main():

    # for testing existing data model parts with the YAML Interface
    db.RecordType(name="TestRT1", datatype=db.TEXT).insert()
    db.Property(name="TestP1", datatype=db.TEXT).insert()

    model = parse_model_from_yaml("model.yml")
    model.sync_data_model(noquestion=True)

    if len(db.execute_query("FIND Property alias")) == 0:
        al = db.Property(name="alias")
        al.add_parent(name="name")
        al.insert()

    h5model = db.Container()
    h5file = h5py.File(
        'extroot/ExperimentalData/2010_TestProject/2019-02-03/hdf5_dummy_file.hdf5', 'r')
    H5CFood.create_structure(h5file, create_recordTypes=True, collection=h5model,
                             root_name="ExampleH5")
    h5model = DataModel(h5model)
    h5model.sync_data_model(noquestion=True)


if __name__ == "__main__":
    main()