From 17855533c3ddc47d825c081d9c30e3ba0f4040da Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Henrik=20tom=20W=C3=B6rden?= <h.tomwoerden@indiscale.com>
Date: Tue, 30 May 2023 12:51:43 +0200
Subject: [PATCH] Add subtype for T1weighted JSON side car
---
src/bids-cfood/cfood.yml | 7 ++++++-
1 file changed, 6 insertions(+), 1 deletion(-)
diff --git a/src/bids-cfood/cfood.yml b/src/bids-cfood/cfood.yml
index 446e40a..39b7811 100644
--- a/src/bids-cfood/cfood.yml
+++ b/src/bids-cfood/cfood.yml
@@ -34,10 +34,11 @@ metadata:
params:
suffix: null
parent: null
+ extension: "[.a-zA-Z0-9]+"
definition:
${parent}_datafile:
type: SimpleFile
- match: ^sub-(?P<sub>[a-zA-Z0-9]+)(_ses-(?P<ses>[a-zA-Z0-9]+))?(_acq-(?P<acq>[a-zA-Z0-9]+))?(_ce-(?P<ce>[a-zA-Z0-9]+))?(_rec-(?P<rec>[a-zA-Z0-9]+))?(_run-(?P<run>[a-zA-Z0-9]+))?(_mod-(?P<mod>[a-zA-Z0-9]+))?(_echo-(?P<echo>[a-zA-Z0-9]+))?(_inv-(?P<inv>[a-zA-Z0-9]+))?(_flip-(?P<flip>[a-zA-Z0-9]+))?(_mt-(?P<mt>[a-zA-Z0-9]+))?(_part-(?P<part>[a-zA-Z0-9]+))?(_(?P<suffix>${suffix}))?\.(?P<extension>[.a-zA-Z0-9]+)$
+ match: ^sub-(?P<sub>[a-zA-Z0-9]+)(_ses-(?P<ses>[a-zA-Z0-9]+))?(_acq-(?P<acq>[a-zA-Z0-9]+))?(_ce-(?P<ce>[a-zA-Z0-9]+))?(_rec-(?P<rec>[a-zA-Z0-9]+))?(_run-(?P<run>[a-zA-Z0-9]+))?(_mod-(?P<mod>[a-zA-Z0-9]+))?(_echo-(?P<echo>[a-zA-Z0-9]+))?(_inv-(?P<inv>[a-zA-Z0-9]+))?(_flip-(?P<flip>[a-zA-Z0-9]+))?(_mt-(?P<mt>[a-zA-Z0-9]+))?(_part-(?P<part>[a-zA-Z0-9]+))?(_(?P<suffix>${suffix}))?\.(?P<extension>${extension})$
records:
someFile:
parents:
@@ -476,6 +477,10 @@ project_level:
- suffix: MTS
parent: "MagnetizationTransferSaturation"
- suffix: T1w
+ extension: json
+ parent: "T1WeightedImageJSON"
+ - suffix: T1w
+ extension: (?!json)
parent: "T1WeightedImage"
- suffix: T2starw
parent: "T2starWeightedImage"
--
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