diff --git a/CHANGELOG.md b/CHANGELOG.md
index 5bc1533ad0daaf92801a07ad69d9330590e59fbf..d674221f0d4de2c6584d2ca68335b1caa9d1d39d 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -51,7 +51,7 @@ This is a major update. Switching from integer ids for internal and external use
### Removed ###
* Deactivate procedure `delete_all_entity_versions`. This might be used in the
- future, that why we keep the code in a comment.
+ future, that is why we keep the code in a comment.
* Drop procedure `retrieveSubEntity`
* Drop procedure `retrieveDatatype`
* Drop procedure `retrieveGroup`
diff --git a/patches/patch20221122-6.0-SNAPSHOT/patch.sh b/patches/patch20221122-6.0-SNAPSHOT/patch.sh
index 7348ac0cff33b557b4251ee35f3e64ae87ccc86a..54208ab713ae9cc7bc6db8ae7501f1266e2bec86 100755
--- a/patches/patch20221122-6.0-SNAPSHOT/patch.sh
+++ b/patches/patch20221122-6.0-SNAPSHOT/patch.sh
@@ -2,8 +2,8 @@
#
# This file is a part of the CaosDB Project.
#
-# Copyright (C) 2022 IndiScale GmbH <info@indiscale.com>
-# Copyright (C) 2022 Timm Fitschen <t.fitschen@indiscale.com>
+# Copyright (C) 2023 IndiScale GmbH <info@indiscale.com>
+# Copyright (C) 2023 Timm Fitschen <t.fitschen@indiscale.com>
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
diff --git a/procedures/getDependentEntities.sql b/procedures/getDependentEntities.sql
index 6272fd00f9329e3f176563d8fce01a63e0849d20..0940e440661c0d73f2eea03e3e10d10082c9eb9e 100644
--- a/procedures/getDependentEntities.sql
+++ b/procedures/getDependentEntities.sql
@@ -26,10 +26,10 @@ DROP PROCEDURE IF EXISTS db_5_0.getDependentEntities;
delimiter //
/*
- * Return all entities which either reference the given entity, use the given *
+ * Return all entities which either reference the given entity, use the given
* reference as data type, or are direct children of the given entity.
*
- * This function is being used to make sure that no entity can be deleted which
+ * This function used to make sure that no entity can be deleted which
* is still needed by others.
*
* Parameters
@@ -47,48 +47,48 @@ BEGIN
DECLARE InternalEntityID INT UNSIGNED DEFAULT NULL;
- DROP TEMPORARY TABLE IF EXISTS refering;
- CREATE TEMPORARY TABLE refering (
+ DROP TEMPORARY TABLE IF EXISTS referring;
+ CREATE TEMPORARY TABLE referring (
id INT UNSIGNED UNIQUE
);
SELECT internal_id INTO InternalEntityID from entity_ids WHERE id = EntityID;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM reference_data WHERE (value=InternalEntityID OR property_id=InternalEntityID) AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM reference_data WHERE (value=InternalEntityID OR property_id=InternalEntityID) AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM reference_data WHERE (value=InternalEntityID OR property_id=InternalEntityID) AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM reference_data WHERE (value=InternalEntityID OR property_id=InternalEntityID) AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM text_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM text_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM text_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM text_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM enum_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM enum_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM enum_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM enum_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM name_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM name_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM name_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM name_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM integer_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM integer_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM integer_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM integer_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM double_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM double_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM double_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM double_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM datetime_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM datetime_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM datetime_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM datetime_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM date_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM date_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM date_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM date_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id FROM null_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id FROM null_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
+ INSERT IGNORE INTO referring (id) SELECT entity_id FROM null_data WHERE property_id=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id FROM null_data WHERE property_id=InternalEntityID AND domain_id!=InternalEntityID AND entity_id!=InternalEntityID AND domain_id!=0;
- INSERT IGNORE INTO refering (id) SELECT entity_id from data_type WHERE datatype=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT domain_id from data_type WHERE datatype=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT entity_id from data_type WHERE datatype=InternalEntityID AND domain_id=0 AND entity_id!=InternalEntityID;
+ INSERT IGNORE INTO referring (id) SELECT domain_id from data_type WHERE datatype=InternalEntityID;
- INSERT IGNORE INTO refering (id) SELECT child FROM isa_cache WHERE parent = InternalEntityID AND rpath=child;
+ INSERT IGNORE INTO referring (id) SELECT child FROM isa_cache WHERE parent = InternalEntityID AND rpath = child;
- SELECT e.id FROM refering AS r LEFT JOIN entity_ids AS e ON r.id = e.internal_id WHERE r.id!=0 AND e.internal_id!=InternalEntityID;
+ SELECT e.id FROM referring AS r LEFT JOIN entity_ids AS e ON r.id = e.internal_id WHERE r.id!=0 AND e.internal_id!=InternalEntityID;
- DROP TEMPORARY TABLE refering;
+ DROP TEMPORARY TABLE referring;
END;
//
diff --git a/procedures/insertEntity.sql b/procedures/insertEntity.sql
index 4b385f202e66b8dea2a8ebe1aa66322718e629a9..816fe8bae65c8a92569d4229993815d6ac0634af 100644
--- a/procedures/insertEntity.sql
+++ b/procedures/insertEntity.sql
@@ -53,7 +53,7 @@ BEGIN
DECLARE Transaction VARBINARY(255) DEFAULT NULL;
DECLARE InternalEntityID INT UNSIGNED DEFAULT NULL;
- -- insert the acl. the new acl id is being written (c-style) into the
+ -- insert the acl. The new acl id is written (c-style) into the
-- variable NewACLID.
call entityACL(NewACLID, ACL);
diff --git a/procedures/overrideName.sql b/procedures/overrideName.sql
index b651c49ac5036c76bd86b9cb6e643753896654cd..cbd74fd00de550630e8a402b048cbc242479389c 100644
--- a/procedures/overrideName.sql
+++ b/procedures/overrideName.sql
@@ -26,7 +26,7 @@ DROP PROCEDURE IF EXISTS db_5_0.overrideType;
DELIMITER //
/*
- *Insert a name override.
+ * Insert a name override.
*
* Parameters
* ----------
diff --git a/procedures/query/initBackReference.sql b/procedures/query/initBackReference.sql
index 0a5be1b455710d14e372a8e8916bb7ee4df0c9ac..2999fb999615ffc47879dfda2a9f89e6b2b387d5 100644
--- a/procedures/query/initBackReference.sql
+++ b/procedures/query/initBackReference.sql
@@ -26,12 +26,12 @@ DELIMITER //
/*
* Create and initialize two new temporary tables.
*
- * This is being used to initialize the filterin for backreferences to a
+ * This is used to initialize the filterin for backreferences to a
* particular entity (specified by EntityID or EntityName) or using a
* particular property (specified by PropertyID or PropertyName).
*
* The propertiesTable contains all properties matching the PropertyID or
- * PropertyName. The entitiesTable container all entities matching EntityID or
+ * PropertyName. The entitiesTable contains all entities matching EntityID or
* EntityName.
* Parameters
diff --git a/procedures/query/initPOV.sql b/procedures/query/initPOV.sql
index 69713297aa00680c0179bc6d34f37596801d4fe9..31347ba9a7f2cde33e619e50e7721875232b8628 100644
--- a/procedures/query/initPOV.sql
+++ b/procedures/query/initPOV.sql
@@ -27,8 +27,8 @@ DROP PROCEDURE IF EXISTS db_5_0.initPOVPropertiesTable//
/*
* Create and initialize a new temporary table.
*
- * This is being used to initialize the POV filtering. The resulting table
- * container all properties machting the Property component of the POV filter.
+ * This is used to initialize the POV filtering. The resulting table
+ * contains all properties matching the Property component of the POV filter.
*
* Parameters
* ----------
@@ -112,8 +112,8 @@ DROP PROCEDURE IF EXISTS db_5_0.initPOVRefidsTable //
/*
* Create and initialize a new temporary table.
*
- * This is being used to initialize the POV filtering. The resulting table
- * container all entities machting the Value component of the POV filter (i.e.
+ * This used to initialize the POV filtering. The resulting table
+ * contains all entities matching the Value component of the POV filter (i.e.
* the referenced entities).
*
* Parameters
diff --git a/procedures/query/initSubEntity.sql b/procedures/query/initSubEntity.sql
index 6bddd134fab294e8e5d093889fd77ffc4dba522e..c60ddb61df7370f52ae8218720ad69c5d2bf5023 100644
--- a/procedures/query/initSubEntity.sql
+++ b/procedures/query/initSubEntity.sql
@@ -3,6 +3,8 @@
*
* Copyright (C) 2018 Research Group Biomedical Physics,
* Max-Planck-Institute for Dynamics and Self-Organization Göttingen
+ * Copyright (C) 2023 IndiScale GmbH <info@indiscale.com>
+ * Copyright (C) 2023 Timm Fitschen <t.fitschen@indiscale.com>
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as
@@ -24,7 +26,7 @@ DROP PROCEDURE IF EXISTS db_5_0.initSubEntity;
DELIMITER //
/*
- * Initialize a new temporary by loading an entity and all of it's children
+ * Initialize a new temporary table by loading an entity and all of its children
* into the table (i.e. their internal ids).
*
* This is used by initPOVRefidsTable and initBackReference for sub-property filtering.
diff --git a/procedures/retrieveEntityOverrides.sql b/procedures/retrieveEntityOverrides.sql
index 61a28a0d610a7e3e25d01dd32d2ab748b2eabe50..f552a2c3b7ceafae5255ee69655af426f44b8bb7 100644
--- a/procedures/retrieveEntityOverrides.sql
+++ b/procedures/retrieveEntityOverrides.sql
@@ -24,7 +24,7 @@ DROP PROCEDURE IF EXISTS db_5_0.retrieveOverrides;
delimiter //
/*
- * Retrieve the overriden (overwriting the Abstract Property's) name, description, and datatype.
+ * Retrieve the overridden (overriding the Abstract Property's) name, description, and datatype.
*
* Parameters
* ----------
@@ -44,7 +44,7 @@ delimiter //
* type_override, # the datatype, e.g. DOUBLE
* entity_id, # same as input EntityID
* InternalPropertyID, # internal property id, to be used when property_id
- * # is NULL because a replacement is being using.
+ * # is NULL because a replacement is used.
* property_id, # the property id
*/
CREATE PROCEDURE db_5_0.retrieveOverrides(
@@ -62,7 +62,9 @@ retrieveOverridesBody: BEGIN
-- which are internal ids by definition (and do not have external
-- equivalents). That's why we do the UNION here, falling back to the
-- EntityID.
- SELECT temp.internal_id INTO InternalEntityID FROM (SELECT internal_id AS internal_id FROM entity_ids WHERE id = EntityID UNION SELECT EntityID AS internal_id) AS temp LIMIT 1;
+ SELECT temp.internal_id INTO InternalEntityID
+ FROM (SELECT internal_id AS internal_id FROM
+ entity_ids WHERE id = EntityID UNION SELECT EntityID AS internal_id) AS temp LIMIT 1;
-- DomainID != 0 are always normal (i.e. external) Entity ids.
SELECT internal_id INTO InternalDomainID from entity_ids WHERE id = DomainID;
diff --git a/procedures/retrieveEntityProperties.sql b/procedures/retrieveEntityProperties.sql
index a7026d9589d4f51a1755634fac1fbc0ee694e557..024f3b0cf2dfb6a83eb41078ec30060c88693f2c 100644
--- a/procedures/retrieveEntityProperties.sql
+++ b/procedures/retrieveEntityProperties.sql
@@ -42,7 +42,7 @@ drop procedure if exists db_5_0.retrieveEntityProperties //
* ---------
* InternalPropertyID
* Internal property id, to be used when PropertyID
- * is NULL because a replacement is being using.
+ * is NULL because a replacement is used.
* PropertyID
* The property id
* PropertyValue